There's an earlier post which shows updating and patching the OS. This method used yum to update the OS. It is still valid and available in documentation as well.
Recently Oracle introduced a new way to patch the OS, that is using the dbcli. The dbcli is the tool to use if patching the DB is done using command line. With this new enhancement same tool dbcli could be used to patching and updating the OS as well.
1. To check if any OS updates are available run the get-availableospatches command. If patches are not available updateAvailable will show false.
5. Run the os update.
After a SR Oracle support confimed that updating is hitting a bug (internal 33403308). After the bug was fixed by Oracle development team ran the command again and OS update was successful.
6. Reboot the node and verify the kernel is updated.
Related Post
Updating the OS and Patching OCI PaaS DB Using DBCLI
Recently Oracle introduced a new way to patch the OS, that is using the dbcli. The dbcli is the tool to use if patching the DB is done using command line. With this new enhancement same tool dbcli could be used to patching and updating the OS as well.
1. To check if any OS updates are available run the get-availableospatches command. If patches are not available updateAvailable will show false.
# dbcli get-availableospatches -j2. If updates are available then it will show updateAvailable true and also if a reboot is required after update.
{
"updateAvailable" : false,
"rebootIsRequired" : false,
"updateableRpms" : null,
"installedRpms" : null
}
dbcli get-availableospatchesTo get a list of rpms update use -j option.
Update Available Reboot Required
-------------------- --------------------
Yes Yes
bcli get-availableospatches -j3. Note the kernel before the update.
{
"updateAvailable" : true,
"rebootIsRequired" : true,
"updateableRpms" : [ "bind.x86_64::32:9.11.4-26.P2.el7_9.5", "bind-export-libs.x86_64::32:9.11.4-26.P2.el7_9.5", "bind-libs.x86_64::32:9.11.4-26.P2.el7_9.5", "bind-libs-lite.x86_64::32:9.11.4-26.P2.el7_9.5", "bind-license.noarch::32: 9.11.4-26.P2.el7_9.5", "bind-utils.x86_64::32:9.11.4-26.P2.el7_9.5", "curl.x86_64::7.29.0-59.0.3.el7_9.1", "device-mapper.x86_64::7:1.02.170-6.0.5.el7_9.5", "device-mapper-event.x86_64::7:1.02.170-6.0.5.el7_9.5", "device-mapper-event-l ibs.x86_64::7:1.02.170-6.0.5.el7_9.5", "device-mapper-libs.x86_64::7:1.02.170-6.0.5.el7_9.5", "device-mapper-multipath.x86_64::0.4.9-134.0.3.el7_9", "device-mapper-multipath-libs.x86_64::0.4.9-134.0.3.el7_9", "dhclient.x86_64::12:4.2.5 -83.0.1.el7_9.1", "dhcp.x86_64::12:4.2.5-83.0.1.el7_9.1", "dhcp-common.x86_64::12:4.2.5-83.0.1.el7_9.1", "dhcp-libs.x86_64::12:4.2.5-83.0.1.el7_9.1", "dmidecode.x86_64::1:3.2-5.0.1.el7_9.1", "glib2.x86_64::2.56.1-9.el7_9", "glibc.i686: :2.17-324.0.1.el7_9", "glibc.x86_64::2.17-324.0.1.el7_9", "glibc-common.x86_64::2.17-324.0.1.el7_9", "glibc-devel.x86_64::2.17-324.0.1.el7_9", "glibc-headers.x86_64::2.17-324.0.1.el7_9", "grub2.x86_64::1:2.02-0.87.0.9.el7_9.6", "grub2- common.noarch::1:2.02-0.87.0.9.el7_9.6", "grub2-efi-x64.x86_64::1:2.02-0.87.0.9.el7_9.6", "grub2-pc.x86_64::1:2.02-0.87.0.9.el7_9.6", "grub2-pc-modules.noarch::1:2.02-0.87.0.9.el7_9.6", "grub2-tools.x86_64::1:2.02-0.87.0.9.el7_9.6", "g rub2-tools-extra.x86_64::1:2.02-0.87.0.9.el7_9.6", "grub2-tools-minimal.x86_64::1:2.02-0.87.0.9.el7_9.6", "gssproxy.x86_64::0.7.0-30.el7_9", "hwdata.x86_64::0.252-9.7.0.1.el7", "iscsi-initiator-utils.x86_64::6.2.0.874-20.0.5.el7_9", "i scsi-initiator-utils-iscsiuio.x86_64::6.2.0.874-20.0.5.el7_9", "kernel-devel.x86_64::3.10.0-1160.36.2.el7", "kernel-headers.x86_64::3.10.0-1160.36.2.el7", "kernel-uek.x86_64::4.1.12-124.53.5.el7uek", "kernel-uek-firmware.noarch::4.1.12 -124.53.5.el7uek", "kexec-tools.x86_64::2.0.15-51.0.3.el7_9.3", "kpartx.x86_64::0.4.9-134.0.3.el7_9", "krb5-libs.x86_64::1.15.1-50.0.1.el7", "libcurl.x86_64::7.29.0-59.0.3.el7_9.1", "libgudev1.x86_64::219-78.0.5.el7_9.3", "libipa_hbac. x86_64::1.16.5-10.0.1.el7_9.8", "libldb.x86_64::1.5.4-2.el7_9", "libsmbclient.x86_64::4.10.16-15.el7_9", "libsss_autofs.x86_64::1.16.5-10.0.1.el7_9.8", "libsss_certmap.x86_64::1.16.5-10.0.1.el7_9.8", "libsss_idmap.x86_64::1.16.5-10.0.1 .el7_9.8", "libsss_nss_idmap.x86_64::1.16.5-10.0.1.el7_9.8", "libsss_sudo.x86_64::1.16.5-10.0.1.el7_9.8", "libwbclient.x86_64::4.10.16-15.el7_9", "libxml2.i686::2.9.1-6.0.3.el7.5", "libxml2.x86_64::2.9.1-6.0.3.el7.5", "libxml2-python.x 86_64::2.9.1-6.0.3.el7.5", "linux-firmware.noarch::999:20210617-999.8.git0f66b74b.el7", "lvm2.x86_64::7:2.02.187-6.0.5.el7_9.5", "lvm2-libs.x86_64::7:2.02.187-6.0.5.el7_9.5", "mokutil.x86_64::15.3-1.0.5.el7", "nettle.x86_64::2.7.1-9.el 7_9", "nfs-utils.x86_64::1:1.3.0-0.68.0.1.el7.1", "nss.x86_64::3.53.1-7.el7_9", "nss-sysinit.x86_64::3.53.1-7.el7_9", "nss-tools.x86_64::3.53.1-7.el7_9", "openldap.x86_64::2.4.44-23.el7_9", "openssl.x86_64::1:1.0.2k-21.0.3.el7_9", "ope nssl-libs.x86_64::1:1.0.2k-21.0.3.el7_9", "oracle-database-preinstall-19c.x86_64::1.0-3.el7", "pciutils.x86_64::3.5.1-3.0.1.el7", "pciutils-libs.x86_64::3.5.1-3.0.1.el7", "python.x86_64::2.7.5-90.0.3.el7", "python-libs.x86_64::2.7.5-90 .0.3.el7", "python-sssdconfig.noarch::1.16.5-10.0.1.el7_9.8", "redhat-release-server.x86_64::1:7.9-6.0.1.el7_9", "rsyslog.x86_64::8.24.0-57.0.1.el7_9.1", "samba-client-libs.x86_64::4.10.16-15.el7_9", "samba-common.noarch::4.10.16-15.el 7_9", "samba-common-libs.x86_64::4.10.16-15.el7_9", "screen.x86_64::4.1.0-0.27.20120314git3c2946.el7_9", "selinux-policy.noarch::3.13.1-268.0.13.el7_9.2", "selinux-policy-targeted.noarch::3.13.1-268.0.13.el7_9.2", "shim-x64.x86_64::15. 3-1.0.5.el7", "sos.noarch::3.9-5.0.11.el7_9.6", "sssd.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-ad.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-client.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-common.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-common-pac.x 86_64::1.16.5-10.0.1.el7_9.8", "sssd-ipa.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-krb5.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-krb5-common.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-ldap.x86_64::1.16.5-10.0.1.el7_9.8", "sssd-proxy.x86_64::1.16.5 -10.0.1.el7_9.8", "systemd.x86_64::219-78.0.5.el7_9.3", "systemd-libs.x86_64::219-78.0.5.el7_9.3", "systemd-sysv.x86_64::219-78.0.5.el7_9.3", "unzip.x86_64::6.0-22.el7_9" ],
"installedRpms" : [ "bind.x86_64::32:9.11.4-26.P2.el7_9.3", "bind-export-libs.x86_64::32:9.11.4-26.P2.el7_9.3", "bind-libs.x86_64::32:9.11.4-26.P2.el7_9.3", "bind-libs-lite.x86_64::32:9.11.4-26.P2.el7_9.3", "bind-license.noarch::32:9 .11.4-26.P2.el7_9.3", "bind-utils.x86_64::32:9.11.4-26.P2.el7_9.3", "curl.x86_64::7.29.0-59.0.1.el7_9.1", "device-mapper.x86_64::7:1.02.170-6.0.3.el7_9.3", "device-mapper-event.x86_64::7:1.02.170-6.0.3.el7_9.3", "7:1.02.170-6.0.3.el7_9 .3::@pdit_ol7_latest/$releasever", "device-mapper-libs.x86_64::7:1.02.170-6.0.3.el7_9.3", "0.4.9-134.0.1.el7_9::@pdit_ol7_latest/$releasever", "0.4.9-134.0.1.el7_9::@pdit_ol7_latest/$releasever", "dhclient.x86_64::12:4.2.5-82.0.1.el7", "dhcp.x86_64::12:4.2.5-82.0.1.el7", "dhcp-common.x86_64::12:4.2.5-82.0.1.el7", "dhcp-libs.x86_64::12:4.2.5-82.0.1.el7", "dmidecode.x86_64::1:3.2-5.el7", "glib2.x86_64::2.56.1-8.el7", "glibc.i686::2.17-322.0.1.el7_9", "glibc.x86_64::2. 17-322.0.1.el7_9", "glibc-common.x86_64::2.17-322.0.1.el7_9", "glibc-devel.x86_64::2.17-322.0.1.el7_9", "glibc-headers.x86_64::2.17-322.0.1.el7_9", "grub2.x86_64::1:2.02-0.87.0.5.el7", "grub2-common.noarch::1:2.02-0.87.0.5.el7", "grub2 -efi-x64.x86_64::1:2.02-0.87.0.5.el7", "grub2-pc.x86_64::1:2.02-0.87.0.5.el7", "grub2-pc-modules.noarch::1:2.02-0.87.0.5.el7", "grub2-tools.x86_64::1:2.02-0.87.0.5.el7", "grub2-tools-extra.x86_64::1:2.02-0.87.0.5.el7", "grub2-tools-min imal.x86_64::1:2.02-0.87.0.5.el7", "gssproxy.x86_64::0.7.0-29.el7", "hwdata.x86_64::0.252-9.7.el7", "6.2.0.874-20.0.1.el7_9::@pdit_ol7_latest/$releasever", "6.2.0.874-20.0.1.el7_9::@pdit_ol7_latest/$releasever", "kernel-devel.x86_64::3 .10.0-1160.15.2.el7", "kernel-headers.x86_64::3.10.0-1160.15.2.el7", "kernel-uek.x86_64::4.1.12-124.47.3.el7uek", "kernel-uek-firmware.noarch::4.1.12-124.47.3.el7uek", "kexec-tools.x86_64::2.0.15-51.0.3.el7_9.1", "kpartx.x86_64::0.4.9- 134.0.1.el7_9", "krb5-libs.x86_64::1.15.1-50.el7", "libcurl.x86_64::7.29.0-59.0.1.el7_9.1", "libgudev1.x86_64::219-78.0.1.el7_9.3", "libipa_hbac.x86_64::1.16.5-10.0.1.el7_9.7", "libldb.x86_64::1.5.4-1.el7", "libsmbclient.x86_64::4.10.1 6-9.el7_9", "libsss_autofs.x86_64::1.16.5-10.0.1.el7_9.7", "libsss_certmap.x86_64::1.16.5-10.0.1.el7_9.7", "libsss_idmap.x86_64::1.16.5-10.0.1.el7_9.7", "libsss_nss_idmap.x86_64::1.16.5-10.0.1.el7_9.7", "libsss_sudo.x86_64::1.16.5-10.0 .1.el7_9.7", "libwbclient.x86_64::4.10.16-9.el7_9", "libxml2.i686::2.9.1-6.0.1.el7.5", "libxml2.x86_64::2.9.1-6.0.1.el7.5", "libxml2-python.x86_64::2.9.1-6.0.1.el7.5", "linux-firmware.noarch::999:20200902-999.5.gitd5f9eea5.el7", "lvm2. x86_64::7:2.02.187-6.0.3.el7_9.3", "lvm2-libs.x86_64::7:2.02.187-6.0.3.el7_9.3", "mokutil.x86_64::15-2.0.9.el7", "nettle.x86_64::2.7.1-8.el7", "nfs-utils.x86_64::1:1.3.0-0.68.0.1.el7", "nss.x86_64::3.53.1-3.el7_9", "nss-sysinit.x86_64: :3.53.1-3.el7_9", "nss-tools.x86_64::3.53.1-3.el7_9", "openldap.x86_64::2.4.44-22.el7", "openssl.x86_64::1:1.0.2k-21.el7_9", "openssl-libs.x86_64::1:1.0.2k-21.el7_9", "1.0-2.el7::@pdit_ol7_latest/$releasever", "pciutils.x86_64::3.5.1-3 .el7", "pciutils-libs.x86_64::3.5.1-3.el7", "python.x86_64::2.7.5-90.0.1.el7", "python-libs.x86_64::2.7.5-90.0.1.el7", "python-sssdconfig.noarch::1.16.5-10.0.1.el7_9.7", "1:7.9-3.0.1.el7::@pdit_ol7_latest/$releasever", "rsyslog.x86_64: :8.24.0-57.el7_9", "samba-client-libs.x86_64::4.10.16-9.el7_9", "samba-common.noarch::4.10.16-9.el7_9", "samba-common-libs.x86_64::4.10.16-9.el7_9", "screen.x86_64::4.1.0-0.26.20120314git3c2946.el7", "selinux-policy.noarch::3.13.1-268. 0.1.el7_9.2", "3.13.1-268.0.1.el7_9.2::@pdit_ol7_latest/$releasever", "shim-x64.x86_64::15-2.0.9.el7", "sos.noarch::3.9-5.0.3.el7_9.2", "sssd.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-ad.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-client.x86_64: :1.16.5-10.0.1.el7_9.7", "sssd-common.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-common-pac.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-ipa.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-krb5.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-krb5-common.x86_64::1.16. 5-10.0.1.el7_9.7", "sssd-ldap.x86_64::1.16.5-10.0.1.el7_9.7", "sssd-proxy.x86_64::1.16.5-10.0.1.el7_9.7", "systemd.x86_64::219-78.0.1.el7_9.3", "systemd-libs.x86_64::219-78.0.1.el7_9.3", "systemd-sysv.x86_64::219-78.0.1.el7_9.3", "unzi p.x86_64::6.0-21.el7" ]
}
uname -r4. Run the pre-update check for the os.
4.1.12-124.47.3.el7uek.x86_64
dbcli update-server -c os -pCheck if pre-udpate check is successful.
{
"jobId" : "9b02cf04-92a2-4299-8cd0-4ce649b962ec",
"status" : "Created",
"message" : null,
"reports" : [ ],
"createTimestamp" : "September 24, 2021 14:18:46 PM BST",
"resourceList" : [ ],
"description" : "OS Patching Prechecks",
"updatedTime" : "September 24, 2021 14:18:47 PM BST",
"percentageProgress" : "0%",
"cause" : null,
"action" : null
}
dbcli describe-job -i "9b02cf04-92a2-4299-8cd0-4ce649b962ec"
Job details
----------------------------------------------------------------
ID: 9b02cf04-92a2-4299-8cd0-4ce649b962ec
Description: OS Patching Prechecks
Status: Success
Created: September 24, 2021 2:18:46 PM BST
Progress: 100%
Message:
Task Name Start Time End Time Status
------------------------------------------------------------------------ ----------------------------------- ----------------------------------- ----------
5. Run the os update.
dbcli update-server -c osThe first run of the OS update failed with below output..
{
"jobId" : "a7097060-6234-401d-bfd7-1c1fcbb9de85",
"status" : "Created",
"message" : null,
"reports" : [ ],
"createTimestamp" : "September 24, 2021 15:41:34 PM BST",
"resourceList" : [ ],
"description" : "OS Patching",
"updatedTime" : "September 24, 2021 15:41:34 PM BST",
"percentageProgress" : "0%",
"cause" : null,
"action" : null
}
dbcli describe-job -i "a7097060-6234-401d-bfd7-1c1fcbb9de85"
Job details
----------------------------------------------------------------
ID: a7097060-6234-401d-bfd7-1c1fcbb9de85
Description: OS Patching
Status: Failure
Created: September 24, 2021 3:41:34 PM BST
Progress: 78%
Message: DCS-10206:Patch bundle conflicts with: Yum Failed to resolve conflict
Cause: Conflict check failed.
Action: Rollback the conflicting patches and retry the operation.
Task Name Start Time End Time Status
------------------------------------------------------------------------ ----------------------------------- ----------------------------------- ----------
OS Component Patching September 24, 2021 3:41:34 PM BST September 24, 2021 4:22:04 PM BST Failure
task:TaskSequential_919 September 24, 2021 3:56:45 PM BST September 24, 2021 4:22:04 PM BST Failure
Validating OS Patches September 24, 2021 3:56:45 PM BST September 24, 2021 4:22:04 PM BST Failure
After a SR Oracle support confimed that updating is hitting a bug (internal 33403308). After the bug was fixed by Oracle development team ran the command again and OS update was successful.
dbcli update-server -c osThe issue seems to have been fixed permanently as subsequent OS patching of other DB systems didn't have any issue.
{
"jobId" : "b1ad604f-7961-4854-a05d-9e43958312b7",
"status" : "Created",
"message" : null,
"reports" : [ ],
"createTimestamp" : "September 29, 2021 09:32:50 AM BST",
"resourceList" : [ ],
"description" : "OS Patching",
"updatedTime" : "September 29, 2021 09:32:51 AM BST",
"percentageProgress" : "0%",
"cause" : null,
"action" : null
}
dbcli describe-job -i "b1ad604f-7961-4854-a05d-9e43958312b7"
Job details
----------------------------------------------------------------
ID: b1ad604f-7961-4854-a05d-9e43958312b7
Description: OS Patching
Status: Success
Created: September 29, 2021 9:32:50 AM BST
Progress: 100%
Message:
Task Name Start Time End Time Status
------------------------------------------------------------------------ ----------------------------------- ----------------------------------- ----------
6. Reboot the node and verify the kernel is updated.
uname -r
4.1.12-124.53.5.el7uek.x86_
Related Post
Updating the OS and Patching OCI PaaS DB Using DBCLI